| Time | Delta (ms) | Suite configuration | Test configuration | Class configuration | Groups configuration | Method configuration | Test method | Thread | Instances |
|---|---|---|---|---|---|---|---|---|---|
| 23/07/02 10:11:14 | 0 | >>initialize | Test worker@1565713391 | ||||||
| 23/07/02 10:11:14 | 7 | >>setUpForCommandLineInputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:11:34 | 19267 | >>setUpForHeadlessCommandLineInputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:11:36 | 21954 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:37 | 22281 | >>initialize | Test worker@1565713391 | ||||||
| 23/07/02 10:11:37 | 22281 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:37 | 22282 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:37 | 22376 | >>clearDesktop | Test worker@1565713391 | ||||||
| 23/07/02 10:11:37 | 22376 | >>initialize | Test worker@1565713391 | ||||||
| 23/07/02 10:11:37 | 22376 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:37 | 22776 | >>populateExpectedMapping | Test worker@1565713391 | ||||||
| 23/07/02 10:11:37 | 22777 | >>setUpSiftsClient | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23317 | >>setUpBeforeTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23348 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23351 | testCalculate_noProfile | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23354 | testCalculate_withProfile | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23355 | testCompleteConsensus_ignoreGaps_noLogo | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23356 | testCompleteConsensus_includeGaps_showLogo | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23357 | testExtractCdnaProfile | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23360 | testExtractCdnaProfile_countGaps | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23360 | testExtractProfile | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23361 | testExtractProfile_countGaps | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23362 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23362 | testStringConstructor | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23363 | testStringConstructor_blankOccupancyTempFactor | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23364 | testStringConstructor_malformed | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23365 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23368 | testCloseViewer | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23369 | testColourByChain | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23370 | testColourByCharge | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23371 | testColourBySequence | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23381 | testFocusView | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23382 | testGetAtomSpec | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23383 | testGetAtomSpec_alphaOnly | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23384 | testGetColourCommand | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23385 | testGetModelStartNo | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23385 | testGetResidueSpec | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23386 | testGetSelectedResidues | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23386 | testListResidueAttributes | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23387 | testOpenCommandFile | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23387 | testOpenSession | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23388 | testSaveSession | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23389 | testSetAttribute | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23390 | testSetAttributes | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23391 | testSetBackgroundColour | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23392 | testShowBackbone | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23393 | testStartNotifications | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23394 | testStopNotifications | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23394 | testSuperposeStructures | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23395 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23395 | testEqualRef | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23397 | testIsPrimaryCandidate | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23398 | testUpdateFrom | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23399 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23399 | testBuildUrl | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23405 | testParseIds | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23406 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23407 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23407 | getGenomicRangesFromFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23407 | testReverseComplementAllele | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23409 | testReverseComplementAlleles | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23411 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23411 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23413 | testRoundTrip | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23416 | testRoundTrip | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23420 | testRoundTrip | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23446 | testRoundTrip | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23449 | testRoundTrip | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23455 | testRoundTrip | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23457 | testRoundTrip | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23463 | testRoundTrip | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23476 | testRoundTrip | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23488 | testRoundTrip | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23493 | testRoundTrip | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23500 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23500 | checkHelpTargets | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23530 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23531 | testIdentify | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23534 | testIdentify | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23535 | testIdentify | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23536 | testIdentify | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23536 | testIdentify | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23537 | testIdentify | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23538 | testIdentify | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23538 | testIdentify | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23540 | testIdentify | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23540 | testIdentify | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23541 | testIdentify | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23542 | testIdentify | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23542 | testIdentify | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23543 | testIdentify | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23544 | testIdentify | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23544 | testIdentify | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23546 | testIdentify | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23547 | testIdentify | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23555 | testIdentify | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23556 | testIdentify | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23557 | testIdentify | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23557 | testIdentify | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23558 | testIdentify_featureFile | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23559 | testLooksLikeFeatureData | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 23560 | >>setUpBeforeClass | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 24006 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:38 | 24007 | testImportExportPeriodGaps | Test worker@1565713391 | ||||||
| 23/07/02 10:11:39 | 24419 | <<tearDownAfterClass | Test worker@1565713391 | ||||||
| 23/07/02 10:11:39 | 24580 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:39 | 24581 | showConfirmDialogFamilyTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:39 | 24582 | showInputDialogFamilyTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:39 | 24583 | showInternalConfirmDialogFamilyTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:39 | 24759 | showInternalMessageDialogFamilyTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:39 | 24761 | showMessageDialogFamilyTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:39 | 24761 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:39 | 24762 | compareTransferredToRefPDBAnnot | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26140 | mapFer1From3W5V | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26482 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26484 | testGetResidueBoxColour_none | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26485 | testGetResidueBoxColour_userdef | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26487 | testGetResidueBoxColour_zappo | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26488 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26489 | testCloseViewer | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26490 | testColourByChain | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26490 | testColourByCharge | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26491 | testColourBySequence | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26492 | testColourResidues | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26493 | testGetAtomSpec | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26494 | testGetAtomSpec_alphaOnly | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26495 | testGetModelStartNo | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26495 | testGetResidueSpec | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26496 | testLoadFile | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26497 | testOpenCommandFile | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26497 | testOpenSession | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26498 | testSaveSession | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26499 | testSetAttribute | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26499 | testSetAttributes | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26500 | testSetBackgroundColour | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26501 | testShowBackbone | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26502 | testSuperposeStructures | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26503 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26503 | testGetRestClient | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26508 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26509 | testGetURL | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26511 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26511 | testNoDuplicatesInFetchDbRefs | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26512 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26554 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26554 | testIsA | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26556 | testIsCDS | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26557 | testIsSequenceVariant | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26558 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26558 | testAdd | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26561 | testCheckOverflow | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26561 | testPut | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26562 | testCreateFastaSequenceIndex | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26601 | testGetSequenceProxy | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26604 | testGetSequenceProxy_indexed | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26611 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26611 | testExtractGaps | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26614 | testIndexEncode_nucleotide | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26616 | testIndexEncode_peptide | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26617 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26617 | testTranslate | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26618 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26620 | testAdjustForProteinLength | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26622 | testGetCdsRanges | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26624 | testGetEmblEntries | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26656 | testGetSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26678 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26678 | testGetCrossReferences | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26680 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26681 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26682 | coverageForEqualsAndHashFunction | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26685 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26685 | coverageForExceptionBranches | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26688 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26688 | coverageForMiscellaneousBranches | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26690 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26690 | getAllDefaulDisplayedDataColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26691 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26691 | getAllFTSDataColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26692 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26692 | getColumnClassTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26694 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26694 | getColumnMaxWidthTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26695 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26695 | getColumnMinWidthTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26696 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26696 | getColumnPreferredWidthTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26697 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26697 | getDataColumnByNameOrCode | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26699 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26699 | getDataColumnGroupById | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26700 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26700 | getDataColumnsFieldsAsCommaDelimitedString | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26702 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26702 | getDefaultResponsePageSize | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26703 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26703 | getPrimaryKeyColumIndexTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26704 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26704 | getPrimaryKeyColumn | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26705 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26706 | getSearchableDataColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26706 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26707 | testParse | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26719 | testConstructor | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26720 | testFindRegionForColumn | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26720 | testFindRegionForColumn_Visible | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26721 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26721 | >>methodSetup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26721 | colorSchemeTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26721 | >>methodSetup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26722 | hiddenColsTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26723 | >>methodSetup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26723 | hiddenSeqsTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26723 | >>methodSetup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26723 | isShowSeqFeaturesSet | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26724 | >>methodSetup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26724 | roundTripTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26725 | >>methodSetup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26725 | testAnnotationParsed | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26726 | >>methodSetup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26726 | testBioJSONRoundTripWithColourSchemeNone | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26757 | >>methodSetup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26757 | testGrpParsed | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26759 | >>methodSetup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26759 | testGrpParsed_colourNone | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26784 | >>methodSetup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26784 | testSeqParsed | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26786 | testGetExtension | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26786 | testGetImageIcon | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26791 | testGetTypeDescription | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26792 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26792 | testGetScrollBarProportion | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26793 | testGetScrollValueForProportion | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26794 | testWrapTooltip_longText | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26795 | testWrapTooltip_multilineShortText | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26796 | testWrapTooltip_shortText | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26797 | testGetPostRequest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26798 | testGetPymolPaths | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26802 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26802 | testGetResidueColour_none | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26803 | testGetResidueColour_userdef | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26804 | testGetResidueColour_zappo | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26804 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26807 | testGetURL | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26808 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26808 | testShmmrService | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26809 | testShmmrServiceDataprep | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26911 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26911 | testAdd | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26912 | testPut | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26912 | testEquals | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26913 | testQuery_plain | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26982 | testReadVcf_plain | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26987 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26987 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26988 | testAsList | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26989 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26989 | testGetShownHiddenTypes_forSelectionGroup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26991 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26991 | testGetShownHiddenTypes_noSequenceSelected | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26992 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26992 | testGetShownHiddenTypes_withGraphGroups | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26993 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26993 | testGetVisibleGraphGroups | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26994 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26994 | testCloseViewer | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26994 | testColourByChain | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26994 | testColourByCharge | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26995 | testColourBySequence | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26996 | testFocusView | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26996 | testGetAtomSpec | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26997 | testGetAtomSpec_alphaOnly | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26998 | testGetColourCommand | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26998 | testGetModelStartNo | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26998 | testGetResidueAttributes | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26999 | testGetResidueSpec | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 26999 | testGetSelectedResidues | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27000 | testListResidueAttributes | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27000 | testLoadFile | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27001 | testMakeAttributeName | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27001 | testOpenCommandFile | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27002 | testOpenSession | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27002 | testSaveSession | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27003 | testSetAttribute | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27003 | testSetAttributes | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27004 | testSetBackgroundColour | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27004 | testShowBackbone | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27005 | testStartNotifications | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27006 | testStopNotifications | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27006 | testSuperposeStructures | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27007 | >>setUpBeforeClass | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27007 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27007 | testStandardProtDbs | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27008 | <<tearDownAfterClass | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27008 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27008 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27008 | testGetGenomicRangesFromFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27011 | testGetGenomicRangesFromFeatures_mixedStrand | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27012 | testGetGenomicRangesFromFeatures_reverseStrand | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27013 | testGetIdentifyingFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27014 | testIsValidReference | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27014 | testRetainFeature | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27015 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27015 | testAdjustForHiddenColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27016 | testBoundedIterator | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27016 | testBoundedStartIterator | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27017 | testCopyConstructor | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27018 | testCopyConstructor2 | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27018 | testEquals | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27019 | testFindColumnPosition | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27020 | testGetNextHiddenBoundary_Left | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27020 | testGetNextHiddenBoundary_Right | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27020 | testGetRegionWithEdgeAtRes | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27021 | testGetSize | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27022 | testGetVisibleColsIterator | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27023 | testGetVisibleStartAndEndIndex | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27024 | testHasHiddenColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27024 | testHasManyHiddenColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27025 | testHashCode | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27025 | testHideColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27027 | testHideColumns_BitSet | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27028 | testHideColumns_BitSet_range | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27028 | testHideColumns_subsumingHidden | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27029 | testHideInsertionsFor | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27030 | testIsVisible | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27030 | testIterator | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27031 | testOffsetByVisibleColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27031 | testRegionsToString | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27032 | testRevealAllHiddenColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27032 | testRevealHiddenColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27033 | testVisibleBlocksVisBoundsIterator | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27033 | testVisibleContigsIterator | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27034 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27035 | testColourByChain | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27036 | testColourByCharge | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27037 | testColourBySequence | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27039 | testFocusView | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27039 | testGetAtomSpec | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27040 | testGetColourBySequenceCommands_hiddenColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27071 | testGetModelStartNo | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27071 | testLoadFile | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27072 | testOpenSession | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27072 | testSaveSession | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27072 | testSetBackgroundColour | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27073 | testShowBackbone | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27074 | testSuperposeStructures | Test worker@1565713391 | ||||||
| 23/07/02 10:11:41 | 27074 | >>setUpBeforeClass | Test worker@1565713391 | 1237144823 1801422599 1998882269 | |||||
| 23/07/02 10:11:41 | 27075 | >>setUpJvOptionPane | Test worker@1565713391 | 1237144823 1801422599 1998882269 | |||||
| 23/07/02 10:11:41 | 27075 | testTreeIO | Test worker@1565713391 | 1237144823 1801422599 1998882269 | |||||
| 23/07/02 10:11:41 | 27103 | <<tearDownAfterClass | Test worker@1565713391 | 1237144823 1801422599 1998882269 | |||||
| 23/07/02 10:11:41 | 27103 | >>setUpBeforeClass | Test worker@1565713391 | 1237144823 1801422599 1998882269 | |||||
| 23/07/02 10:11:41 | 27103 | >>setUpJvOptionPane | Test worker@1565713391 | 1237144823 1801422599 1998882269 | |||||
| 23/07/02 10:11:41 | 27103 | testTreeIO | Test worker@1565713391 | 1237144823 1801422599 1998882269 | |||||
| 23/07/02 10:11:41 | 27111 | <<tearDownAfterClass | Test worker@1565713391 | 1237144823 1801422599 1998882269 | |||||
| 23/07/02 10:11:41 | 27112 | >>setUpBeforeClass | Test worker@1565713391 | 1237144823 1801422599 1998882269 | |||||
| 23/07/02 10:11:41 | 27112 | >>setUpJvOptionPane | Test worker@1565713391 | 1237144823 1801422599 1998882269 | |||||
| 23/07/02 10:11:41 | 27112 | testTreeIO | Test worker@1565713391 | 1237144823 1801422599 1998882269 | |||||
| 23/07/02 10:11:42 | 27116 | <<tearDownAfterClass | Test worker@1565713391 | 1237144823 1801422599 1998882269 | |||||
| 23/07/02 10:11:42 | 27117 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27117 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27117 | testGetChargeColour | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27117 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27117 | testGetNewlineString | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27118 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27118 | testMakeBond | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27119 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27119 | testMakeCaBondList | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27119 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27119 | testMakeCaBondList_nucleotide | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27120 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27120 | testMakeExactMapping | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27121 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27121 | testMakeResidueList_noAnnotation | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27123 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27123 | testMakeResidueList_withTempFactor | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27124 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27124 | testPrint | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27125 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27125 | testSetChainColours_colour | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27125 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27126 | testSetChainColours_colourScheme | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27126 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27126 | testSetChargeColours | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27127 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27127 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27127 | populateCmbSearchTargetOptionsTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27215 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27215 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27215 | testDecodeSearchTerm | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27216 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27216 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27217 | testgetPDBIdwithSpecifiedChain | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27218 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27219 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27219 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27219 | testGetAssociatedPanels | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27256 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27256 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27256 | testRegister | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27257 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27258 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27258 | testRemoveComponent | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27258 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27258 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27260 | testGetURL | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27261 | testAboveThreshold | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27262 | testApplyConservation | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27262 | testFindColour_gapColour | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27264 | testEquals | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27265 | testGetPDBResNumRanges | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27266 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27266 | testGetDescription | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27268 | testGetUniprotEntries | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27332 | testGetUniprotEntryDescription | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27353 | testGetUniprotEntryId | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27380 | testGetUniprotSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27406 | testSortByFeature_density | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27406 | testSortByFeature_score | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27410 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27410 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27410 | testGetGenomicRangesFromFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27411 | testGetIdentifyingFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27411 | testIsValidReference | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27412 | testRetainFeature | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27412 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27412 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27412 | testAdjustForHiddenSeqs | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27413 | testAdjustHeightSequenceAdded | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27413 | testAdjustHeightSequenceDeleted | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27413 | testFindIndexNFromRow | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27414 | testFindIndexWithoutHiddenSeqs | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27414 | testGetFullAlignment | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27414 | testGetHiddenSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27415 | testGetSize | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27415 | testGetWidth | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27415 | testHideShowLastSequences | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27415 | testHideShowSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27415 | testHideShowSequence_withHiddenRepSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27416 | testIsHidden | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27417 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27417 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:42 | 27418 | testAlignmentLoader | Test worker@1565713391 | ||||||
| 23/07/02 10:11:43 | 28338 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:43 | 28341 | testFileParser | Test worker@1565713391 | ||||||
| 23/07/02 10:11:44 | 29200 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:44 | 29202 | testLocalPDBId | Test worker@1565713391 | ||||||
| 23/07/02 10:11:44 | 29411 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:44 | 29413 | testParse_alternativeResidues | Test worker@1565713391 | ||||||
| 23/07/02 10:11:44 | 29643 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:44 | 29645 | testParse_missingResidues | Test worker@1565713391 | ||||||
| 23/07/02 10:11:44 | 29889 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:44 | 29892 | testSetSecondaryStructure | Test worker@1565713391 | ||||||
| 23/07/02 10:11:44 | 29892 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:44 | 29892 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:44 | 29892 | getPDBDocFieldsAsCommaDelimitedStringTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:44 | 29893 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:44 | 29893 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:44 | 29893 | getPDBIdColumIndexTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:44 | 29893 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:44 | 29894 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:44 | 29894 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:44 | 29895 | testIsRna | Test worker@1565713391 | ||||||
| 23/07/02 10:11:44 | 29896 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:44 | 29898 | testParse | Test worker@1565713391 | ||||||
| 23/07/02 10:11:44 | 29911 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:44 | 29912 | testParse_withAnnotations_noSS | Test worker@1565713391 | ||||||
| 23/07/02 10:11:44 | 29924 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:44 | 29925 | testParse_withJmolAddAlignmentAnnotations | Test worker@1565713391 | ||||||
| 23/07/02 10:11:45 | 30245 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:45 | 30247 | testParse_withJmol_noAnnotations | Test worker@1565713391 | ||||||
| 23/07/02 10:11:45 | 30633 | testConstructor_noSelectionGroup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:45 | 30683 | testConstructor_withSelectionGroup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:45 | 30720 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:45 | 30720 | testPfamFormatNoLimits | Test worker@1565713391 | ||||||
| 23/07/02 10:11:45 | 30721 | testPfamFormatValidLimits | Test worker@1565713391 | ||||||
| 23/07/02 10:11:45 | 30721 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:45 | 30724 | testGetURL | Test worker@1565713391 | ||||||
| 23/07/02 10:11:45 | 30725 | testCalculateMarks | Test worker@1565713391 | ||||||
| 23/07/02 10:11:45 | 30753 | >>setUpBeforeClass | Test worker@1565713391 | ||||||
| 23/07/02 10:11:45 | 30826 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:45 | 30826 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:45 | 30826 | testRegisterMapping | Test worker@1565713391 | ||||||
| 23/07/02 10:11:45 | 30833 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:45 | 30833 | testRegisterMappings | Test worker@1565713391 | ||||||
| 23/07/02 10:11:45 | 30834 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:45 | 30834 | testSetMapping_seqFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:11:46 | 31199 | <<tearDownAfterClass | Test worker@1565713391 | ||||||
| 23/07/02 10:11:46 | 31204 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:46 | 31204 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:46 | 32028 | testBuildColoursMap | Test worker@1565713391 | ||||||
| 23/07/02 10:11:46 | 32074 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:47 | 32768 | testFindSuperposableResidues | Test worker@1565713391 | ||||||
| 23/07/02 10:11:47 | 32769 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:48 | 33527 | testFindSuperposableResidues_hiddenColumn | Test worker@1565713391 | ||||||
| 23/07/02 10:11:48 | 33527 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34300 | testImportPDBPreservesChainMappings | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34554 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34554 | testAddMappedPositions | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34554 | testAddMappedPositions_withStopCodon | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34555 | testAlignAsSameSequences | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34558 | testAlignAsSameSequencesMultipleSubSeq | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34559 | testAlignAs_alternateTranscriptsUngapped | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34559 | testAlignProteinAsDna | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34561 | testAlignProteinAsDna_incompleteStartCodon | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34561 | testAlignSequenceAs_keepIntronGapsOnly | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34562 | testAlignSequenceAs_mappedProteinProtein | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34562 | testAlignSequenceAs_withMapping_noIntrons | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34563 | testAlignSequenceAs_withMapping_withIntrons | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34563 | testAlignSequenceAs_withMapping_withUnmappedProtein | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34564 | testAlignSequenceAs_withTrailingPeptide | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34564 | testExpandContext | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34572 | testExpandContext_annotation | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34573 | testFindCdsPositions | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34573 | testFindCdsPositions_fivePrimeIncomplete | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34574 | testGetSequencesByName | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34575 | testHasCrossRef | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34576 | testHaveCrossRef | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34576 | testIsMappable | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34577 | testMakeCdsAlignment | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34579 | testMakeCdsAlignment_alternativeTranscripts | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34580 | testMakeCdsAlignment_filterProducts | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34581 | testMakeCdsAlignment_multipleProteins | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34582 | testMapCdnaToProtein_forSubsequence | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34582 | testMapCdsToProtein | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34583 | testMapProteinAlignmentToCdna_noXrefs | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34584 | testMapProteinAlignmentToCdna_prioritiseXrefs | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34584 | testMapProteinAlignmentToCdna_withStartAndStopCodons | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34585 | testMapProteinAlignmentToCdna_withXrefs | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34586 | testShowOrHideSequenceAnnotations | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34586 | testTransferFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34587 | testTransferFeatures_withOmit | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34587 | testTransferFeatures_withSelect | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34588 | testTransferGeneLoci | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34589 | testTranslatesAs | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34589 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34591 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34591 | testGetFeatureColourScheme | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34593 | testGetGenomicRangesFromFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34594 | testGetGenomicRangesFromFeatures_ncRNA_gene_reverseStrand | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34594 | testGetIdentifyingFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34595 | testGetTranscriptFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34595 | testRetainFeature | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34596 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34596 | >>setUpBeforeTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34596 | testFindFeatureAtEnd | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34605 | >>setUpBeforeTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34606 | testFindFeatureColour_contactFeature | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34606 | >>setUpBeforeTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34606 | testFindFeatureColour_featureGroupNotDisplayed | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34607 | >>setUpBeforeTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34607 | testFindFeatureColour_featureTypeNotDisplayed | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34609 | >>setUpBeforeTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34609 | testFindFeatureColour_gapPosition | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34610 | >>setUpBeforeTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34610 | testFindFeatureColour_graduatedFeatureColour | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34611 | >>setUpBeforeTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34611 | testFindFeatureColour_graduatedWithThreshold | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34613 | >>setUpBeforeTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34614 | testFindFeatureColour_multipleFeaturesAtPositionNoTransparency | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34615 | >>setUpBeforeTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34615 | testFindFeatureColour_nestedFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34616 | >>setUpBeforeTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34617 | testFindFeatureColour_noFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34618 | >>setUpBeforeTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34618 | testFindFeatureColour_noFeaturesShown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34619 | >>setUpBeforeTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34619 | testFindFeatureColour_singleFeatureAtPosition | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34620 | >>setUpBeforeTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34620 | testFindFeatureColour_singleFeatureNotAtPosition | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34620 | >>setUpBeforeTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34621 | testFindFeatureColour_transparencySingleFeature | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34622 | >>setUpBeforeTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34623 | testFindFeatureColour_transparencyTwoFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34624 | >>setUpBeforeTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34625 | testNoFeaturesDisplayed | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34626 | >>setUpBeforeClass | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34689 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:49 | 34689 | testAddStrToSingleSeqViewJMol | Test worker@1565713391 | ||||||
| 23/07/02 10:11:52 | 37296 | testSingleSeqViewJMol | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38167 | <<tearDownAfterClass | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38213 | testFindProteinVariants | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38215 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38215 | testInterleavedDataExtraction | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38218 | testInterleavedIO | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38236 | testSequentialDataExtraction | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38239 | testSequentialIO | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38246 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38246 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38295 | testAddFeatureDetails | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38306 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38334 | testAddFeatureDetails_linkedFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38335 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38361 | testBuildAnnotationTypesMenus | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38362 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38392 | testBuildAnnotationTypesMenus_hideDisabled | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38393 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38420 | testBuildAnnotationTypesMenus_showDisabled | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38421 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38450 | testBuildLinkMenu | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38456 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38484 | testConfigureReferenceAnnotationsMenu | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38486 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38510 | testConfigureReferenceAnnotationsMenu_alreadyAdded | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38510 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38536 | testConfigureReferenceAnnotationsMenu_noReferenceAnnotations | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38536 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38562 | testConfigureReferenceAnnotationsMenu_noSequenceSelected | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38562 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38588 | testConfigureReferenceAnnotationsMenu_notOnAlignment | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38588 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38620 | testConfigureReferenceAnnotationsMenu_twoViews | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38620 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38646 | testHideInsertions | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38658 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38658 | testFindAtom | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38659 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38659 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38659 | coverageForEqualsAndHashFunction | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38660 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38660 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38660 | getAllFTSDataColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38661 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38661 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38661 | getColumnClassTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38662 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38662 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38662 | getColumnMinWidthTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38663 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38663 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38663 | getDataColumnByNameOrCode | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38663 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38664 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38664 | getDataColumnGroupById | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38664 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38665 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38665 | getDataColumnsFieldsAsCommaDelimitedString | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38665 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38666 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38666 | getDefaultResponsePageSize | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38666 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38667 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38667 | getPrimaryKeyColumIndexTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38667 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38667 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38667 | getPrimaryKeyColumn | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38668 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38668 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38668 | getSearchableDataColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38669 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38669 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38669 | getTDBIdColumIndexTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38671 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38671 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38671 | testMockTDBRequest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38974 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38975 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38976 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38976 | testNoSort_autocalcFirst | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38976 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38976 | testSortBySequenceAndType_autocalcFirst | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38977 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38977 | testSortBySequenceAndType_autocalcLast | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38977 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38977 | testSortByTypeAndSequence_autocalcFirst | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38977 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38977 | testSortByTypeAndSequence_autocalcLast | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38977 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:53 | 38977 | testSort_timingPresorted | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 39184 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 39184 | testSort_timingSemisorted | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 39379 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 39379 | testSort_timingUnsorted | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 39464 | testCreateUrlProvider | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 39466 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 39466 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 39466 | testGetGenomicRangesFromFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 39467 | testGetIdentifyingFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 39468 | testRetainFeature | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 39468 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 39468 | testFilterFeaturesForDisplay | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 39505 | testFindAllFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 39555 | testFindComplementFeaturesAtResidue | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 39834 | testFindFeaturesAtColumn | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 39871 | testGetColour | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 39901 | testIsVisible | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 40015 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 40015 | testCopyConstructor | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 40016 | testIntersectVisContigs | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 40016 | testToString | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 40017 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 40017 | testConstructor_prematureInstantiation | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 40017 | testConstructor_wrongLayout | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 40018 | testSetProgressBar | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 40089 | >>setUpBeforeClass | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 40089 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:54 | 40089 | testRnamlToStockholmIO | Test worker@1565713391 | ||||||
| 23/07/02 10:11:55 | 40216 | <<tearDownAfterClass | Test worker@1565713391 | ||||||
| 23/07/02 10:11:55 | 40216 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:55 | 40216 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:55 | 40216 | populateCmbSearchTargetOptionsTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:55 | 40284 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:55 | 40286 | >>setUpBeforeClass | Test worker@1565713391 | ||||||
| 23/07/02 10:11:55 | 40364 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:55 | 40567 | testChangeColour_background_groupsAndThresholds | Test worker@1565713391 | ||||||
| 23/07/02 10:11:55 | 40616 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:55 | 40621 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:55 | 40695 | testColourThresholdActions | Test worker@1565713391 | ||||||
| 23/07/02 10:11:55 | 40839 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:55 | 40841 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:55 | 40918 | testHideFeatureColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:11:55 | 40937 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:55 | 40940 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:55 | 41012 | testNewView_colourThresholds | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41260 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41266 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41344 | testNewView_dsRefPreserved | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41384 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41389 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41390 | testFindColour_aboveThreshold | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41391 | testFindColour_belowThreshold | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41392 | testFindColour_noThreshold | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41392 | testFindColour_originalColours | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41392 | testShadeCalculation_aboveThreshold | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41393 | testShadeCalculation_belowThreshold | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41393 | testShadeCalculation_noThreshold | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41394 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41394 | testDecodeCodon | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41394 | testDecodeNucleotide | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41394 | testEncodeCodon | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41395 | testDefaultUrl | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41396 | testUrlLinks | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41397 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41397 | testGetAccesionIdFromQuery | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41397 | testIsValidReference | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41398 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41398 | testGetFromRatio | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41399 | testGetInverse | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41400 | testGetToRatio | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41400 | >>setUpBeforeClass | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41450 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41450 | testBuildPopupMenu | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41521 | testPreventNegativeStartColumn | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41538 | testSelectColumns_withHidden | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41562 | testParseMatrix_aaIndexBlosum80 | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41564 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41566 | testParseMatrix_aaindexFormat | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41566 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41569 | testParseMatrix_aaindex_extraDataLines | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41570 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41572 | testParseMatrix_aaindex_mMissing | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41572 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41574 | testParseMatrix_aaindex_rowColMismatch | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41574 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41576 | testParseMatrix_aaindex_tooFewColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41576 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41578 | testParseMatrix_aaindex_tooManyRows | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41579 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41580 | testParseMatrix_headerMissing | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41580 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41582 | testParseMatrix_ncbiBadDelimiter | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41582 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41584 | testParseMatrix_ncbiBadFloat | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41585 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41586 | testParseMatrix_ncbiBadGuideCharacter | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41587 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41588 | testParseMatrix_ncbiFormat | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41588 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41589 | testParseMatrix_ncbiHeaderRepeated | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41589 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41591 | testParseMatrix_ncbiMixedDelimiters | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41591 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41592 | testParseMatrix_ncbiNameMissing | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41595 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41597 | testParseMatrix_ncbiNotEnoughColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41598 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41600 | testParseMatrix_ncbiNotEnoughRows | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41601 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41602 | testParseMatrix_ncbiTooManyColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41602 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41604 | testParseMatrix_ncbiTooManyRows | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41604 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41606 | testParse_ncbiFormat | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41606 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41609 | >>setUpBeforeClass | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41674 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41675 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41675 | testDeregisterMapping_onCloseView | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41777 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41777 | testDeregisterMapping_withNoReference | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41826 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41826 | testDeregisterMapping_withReference | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41921 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 41921 | testGetConsensusSeq | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 42015 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 42016 | testHideRevealSequences | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 42017 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 42017 | testSetGetHasSearchResults | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 42069 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:56 | 42069 | testSetGlobalColourScheme | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 42128 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 42128 | testSetSelectionGroup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 42204 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 42205 | testShowOrDontShowOccupancy | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 42374 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 42375 | testUpdateConservation_qualityOnly | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 42491 | testFindColour | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 42492 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 42492 | testCalculate_noThreshold | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 42493 | testCalculate_threshold | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 42494 | testCountConservationAndGaps | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 42495 | testRecordConservation | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 42495 | testVerdict | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 42497 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 42497 | testCreateUrlProvider | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 42498 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 42498 | testEquals | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 42499 | testToString | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 42499 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 42640 | testCalculateWrappedGeometry_noAnnotations | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 42643 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 42805 | testCalculateWrappedGeometry_withAnnotations | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 42807 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 43006 | testClear_HighlightAndSelection | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 43030 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 43030 | testAppendFeature_DescEqualsType | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 43031 | testAppendFeature_colouredByAttribute | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 43031 | testAppendFeature_disulfideBond | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 43032 | testAppendFeature_noScore | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 43032 | testAppendFeature_status | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 43033 | testAppendFeature_stripHtml | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 43033 | testAppendFeature_virtualFeature | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 43034 | testAppendFeature_withScore | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 43035 | testAppendFeature_withScoreStatusAttribute | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 43035 | testAppendFeatures_longText | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 43036 | testCreateSequenceAnnotationReport | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 43037 | testCreateSequenceAnnotationReport_withEllipsis | Test worker@1565713391 | ||||||
| 23/07/02 10:11:57 | 43041 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:58 | 43533 | testCalculateIdWidth_noArgs | Test worker@1565713391 | ||||||
| 23/07/02 10:11:58 | 43548 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:58 | 43806 | testCalculateIdWidth_withMaxWidth | Test worker@1565713391 | ||||||
| 23/07/02 10:11:58 | 43809 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:58 | 44001 | testGetVisibleWidth | Test worker@1565713391 | ||||||
| 23/07/02 10:11:58 | 44004 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44197 | testSetScrollValues | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44200 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44522 | testUpdateLayout_endRes | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44527 | testFindColour | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44528 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44528 | testFindXDbRefs | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44528 | testFindXrefSequences_fromDbRefMap | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44530 | testFindXrefSequences_indirectDbrefToNucleotide | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44531 | testFindXrefSequences_indirectDbrefToProtein | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44532 | testFindXrefSequences_noDbrefs | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44534 | testFindXrefSourcesForSequence_proteinToDna | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44534 | testSameSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44535 | testSearchDataset | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44535 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44535 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44536 | testDefaultUrl | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44536 | testUrlLinks | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44537 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44537 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44537 | testConstructor_fromDbref | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44538 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44538 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44538 | testEquals | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44538 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44539 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44539 | testGetType | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44539 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44539 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44539 | testSetChainCode | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44539 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44539 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44539 | testTypeMatches | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44540 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44540 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44540 | testUpdateFrom | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44540 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44540 | >>setUpBeforeClass | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44599 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44599 | testAmbiguousAminoAcidGetsStatusMessage | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44654 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44681 | testFindColumn_unwrapped | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44724 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44744 | testFindColumn_wrapped | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44770 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44771 | testFindMousePosition_wrapped_annotations | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44787 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44789 | testFindMousePosition_wrapped_noAnnotations | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44817 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44818 | testFindMousePosition_wrapped_scaleAbove | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44838 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 44839 | testFindMousePosition_wrapped_scales_longSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 45074 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 45076 | testGetEditStatusMessage | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 45077 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 45077 | testGetEditStatusMessage_lockedEditing | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 45077 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 45078 | testSetStatusReturnsNearestResiduePosition | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 45092 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 45092 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 45093 | curlyWUSSsecondaryStructureForRNASequence | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 45096 | dbrefOutput | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 45098 | detectWussBrackets | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 45098 | fullWUSSsecondaryStructureForRNASequence | Test worker@1565713391 | ||||||
| 23/07/02 10:11:59 | 45101 | pfamFileDataExtraction | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45126 | pfamFileIO | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45247 | rfamFileIO | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45349 | secondaryStructureForRNASequence | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45351 | stockholmFileRnaSSAlphaChars | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45356 | stockholmFileRnaSSSpaceChars | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45359 | testAnnotationEquivalence | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45378 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45378 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45400 | testBuildActionButtonsPanel | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45444 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45464 | testBuildApplyToOptionsPanel_noSelectionGroup | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45479 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45515 | testBuildApplyToOptionsPanel_withSelectionGroup | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45527 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45548 | testBuildShowHideOptionsPanel | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45567 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45582 | testBuildShowHidePanel | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45593 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45610 | testDeselectType_hideForAll | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45642 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45661 | testDeselectType_hideForSelected | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45674 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45692 | testDeselectType_showForAll | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45704 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45719 | testDeselectType_showForSelected | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45729 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45741 | testGetAnnotationTypes | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45749 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45762 | testIsInActionScope_selectedScope | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45769 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45780 | testIsInActionScope_unselectedScope | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45789 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45801 | testResetOriginalState | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45812 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45827 | testSelectType_hideForAll | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45836 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45849 | testSelectType_hideForSelected | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45869 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45886 | testSelectType_showForAll | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45898 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45913 | testSelectType_showForSelected | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45925 | testFindColour | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45949 | testFindColour_ignoreGaps | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45973 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45973 | testCompareCodonPos | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45976 | testCompareCodonPos_isSymmetric | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45978 | testCompareCodonPos_oneOnly | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45978 | testConvertCodon | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45979 | testGetComplement | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45979 | testReverseCdna | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45980 | testReverseSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45980 | testTranslateCdna_hiddenColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45981 | testTranslateCdna_sequenceOrderIndependent | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45982 | testTranslateCdna_simple | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45983 | testTranslateCdna_withUntranslatableCodons | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 45989 | testTranslateCdna_withUntranslatableCodonsAndHiddenColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46021 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46021 | testHasNextAndNextEndHidden | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46021 | testHasNextAndNextNoHidden | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46021 | testHasNextAndNextStartHidden | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46021 | testHasNextAndNextWithHidden | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46022 | testLastNextEndHidden | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46022 | testLastNextNoHidden | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46022 | testLastNextStartHidden | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46023 | testLastNextWithHidden | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46023 | testRemove | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46023 | >>setUpBeforeClass | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46094 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46094 | testGetResidueColour_WithGroup | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46095 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46095 | testGetAsArray | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46099 | testGetAsList | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46102 | testHeightAndWidth | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46103 | testHeightAndWidthWithResidueNumbers | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46104 | testParse | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46105 | testReadBlock | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46105 | testReadHeader | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46106 | testWrongFile | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46108 | getValue | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46108 | testDescription | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46108 | testDisplayColumnNames | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46108 | testGetSetValue | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46108 | testIsEditable | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46109 | testName | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46109 | testUrl | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46111 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:00 | 46111 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46165 | testReset | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46294 | testGetColourName | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46295 | testGetColourScheme | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46296 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46327 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46327 | testFindAll | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46330 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46330 | testFindAll_caseSensitive | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46330 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46330 | testFindAll_inSelection | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46331 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46331 | testFindAll_maximalResultOnly | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46331 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46332 | testFindAll_sequenceIds | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46333 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46333 | testFindNext | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46333 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46333 | testFindNext_inSelection | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46334 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46334 | testFind_findAll | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46334 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46334 | testFind_findAllInSelectionWithShortSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46334 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46334 | testFind_findNext | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46335 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46335 | testFind_ignoreHiddenColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46337 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46337 | testFind_inDescription | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46338 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46338 | testFind_regex | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46339 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46339 | testFind_residueNumber | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46340 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46340 | testFind_withHiddenColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46341 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46341 | testFind_withHiddenColumnsAndSelection | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46342 | <<tearDownAfterTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46343 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46343 | testAddGap | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46343 | testGetModalCount | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46343 | testGetResiduesForCount | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46343 | testGetSymbolCounts_nucleotide | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46346 | testGetSymbolCounts_peptide | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46346 | testGetTooltip | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46347 | testOverflow | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46347 | testPut | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46347 | testToString | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46347 | test_countNucleotide | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46348 | test_countPeptide | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46348 | test_unexpectedNucleotide | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46348 | test_unexpectedPeptide | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46348 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46349 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46349 | displayTDBQueryTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46640 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46640 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46641 | fetchStructuresInfoMockedTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46959 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46960 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:01 | 46960 | populateFilterComboBoxTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47132 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47132 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47132 | sanitizeSeqNameTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47133 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47133 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47134 | testColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47135 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47135 | testCounts | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47135 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47136 | testDeletable | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47136 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47137 | testEditable | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47137 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47137 | testInitialisation | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47138 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47138 | testRowDelete | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47140 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47140 | testRowEditable | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47141 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47141 | testRowInsert | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47142 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47143 | testValues | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47144 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47144 | loadAndSaveAlignment | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47173 | <<cleanupTmpFiles | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47176 | testGetStatusMessage | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47176 | testGetTooltip | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47177 | >>setUpCache | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47177 | appCacheLimitTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47177 | appCacheTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47178 | >>setUpBeforeClass | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47251 | testGetColourScheme | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47299 | testGetColourSchemes | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47299 | testNameExists | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47299 | testRegisterColourScheme | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47340 | <<tearDownAfterClass | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47343 | testGetCodeTable | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47343 | testGetCodeTables | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47344 | testTranslate | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47345 | testTranslateCanonical | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47345 | testTranslate_nonStandardTableAmbiguityCodes | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47345 | testTranslate_standardTable | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47346 | testTranslate_standardTableAmbiguityCodes | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47346 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47346 | testAddResult | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47347 | testEquals | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47347 | testEquals_distinctSequences | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47347 | testEquals_orderDiffers | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47347 | testHashcode | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47348 | testInvolvesSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47348 | testMarkColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47349 | testMatchConstructor | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47349 | testMatchContains | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47349 | testToString | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47350 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47350 | testGetSequencesForPdbs | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47350 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47351 | testInitUrlProvider | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47351 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47352 | testSetDefaultUrl | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47352 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47352 | testSetDefaultUrlWrongly | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47354 | testGetRowIndex | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47354 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47354 | testReverseIntArray | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47355 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47355 | testConstructors | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47355 | testCopyConstructor | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47355 | testGetColor_Graduated | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47355 | testGetColor_GraduatedByAttributeValue | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47355 | testGetColor_aboveBelowThreshold | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47356 | testGetColor_colourByAttributeText | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47356 | testGetColor_colourByLabel | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47356 | testGetColor_simpleColour | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47356 | testGetDescription | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47359 | testIsOutwithThreshold | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47359 | testParseJalviewFeatureColour | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47361 | testToJalviewFormat | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47362 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47362 | testMakeGroupsWithBoth | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47364 | >>setUpCache | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47364 | getUserInputTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47466 | updateCacheTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47666 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47667 | testFindPosition | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47668 | testSomething | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47682 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47682 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47682 | buildPDBQueryTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47689 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47689 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47690 | buildThreeDBQueryTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47712 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47713 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 47713 | cascadingThreeDBandPDBQuerys | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 48081 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 48081 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:02 | 48081 | cascadingThreeDBandPDBQuerys | Test worker@1565713391 | ||||||
| 23/07/02 10:12:03 | 48587 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:12:03 | 48587 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:03 | 48588 | cascadingThreeDBandPDBQuerys | Test worker@1565713391 | ||||||
| 23/07/02 10:12:04 | 49981 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:12:04 | 49981 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:04 | 49981 | cascadingThreeDBandPDBQuerys | Test worker@1565713391 | ||||||
| 23/07/02 10:12:05 | 50263 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:12:05 | 50263 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:05 | 50263 | sanitizeSeqNameTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:05 | 50263 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:12:05 | 50265 | >>setUpBeforeClass | Test worker@1565713391 | ||||||
| 23/07/02 10:12:05 | 50316 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:05 | 50316 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:12:05 | 50725 | checkAnnotationWiring | Test worker@1565713391 | ||||||
| 23/07/02 10:12:05 | 50727 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:12:05 | 51108 | checkNoDuplicates | Test worker@1565713391 | ||||||
| 23/07/02 10:12:05 | 51110 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:12:06 | 51429 | checkPDBSequenceFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:12:06 | 51430 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:12:06 | 51752 | testJalviewProjectRelocationAnnotation | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52452 | <<tearDownAfterClass | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52454 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52473 | testGetAnnotationItems | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52474 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52474 | testEquals | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52474 | testHashcode | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52475 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52475 | testAddExonerateGffToAlignment | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52497 | testGetMappingType | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52497 | testProcessGffSimilarity_protein2dna_forward_querygff | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52498 | testProcessGffSimilarity_protein2dna_forward_targetgff | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52498 | testProcessGffSimilarity_protein2dna_reverse_querygff | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52498 | testProcessGffSimilarity_protein2dna_reverse_targetgff | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52498 | testFindColour | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52498 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52498 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52499 | testGetScoresFromDescription | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52502 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52502 | testGetScoresFromDescription_twoScores | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52503 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52503 | testGetScoresFromDescription_wordBoundaries | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52504 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52504 | testBecome | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52506 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52506 | exampleAnnotationFileIO | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52661 | testAnnotateAlignmentView | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52675 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52675 | testReplaceOddGaps | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52680 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52680 | testBleachColour | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52680 | testBrighterThan | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52680 | testCreateColourFromName | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52681 | testDarkerThan | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52681 | testGetAWTColorFromName | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52681 | testGetGraduatedColour | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52681 | testParseColourString | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52682 | testToTkCode | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52683 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52683 | testGetDescription | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52685 | testProcessCdnaMatch_forwardToForward | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52686 | testProcessCdnaMatch_forwardToReverse | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52687 | testProcessCdnaMatch_reverseToForward | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52687 | testProcessCdnaMatch_spliced | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52688 | testFindColour | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52688 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52688 | testGetHelixMap_oneHelix | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52689 | testGetHelixMap_twoHelices | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52689 | testGetMatchingOpeningParenthesis | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52689 | testGetRNASecStrucState | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52690 | testGetSimpleBPs | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52690 | testGetSimpleBPs_unmatchedCloser | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52691 | testGetSimpleBPs_unmatchedOpener | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52691 | testIsCanonicalOrWobblePair | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52692 | testIsCanonicalPair | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52692 | testIsClosingParenthesis | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52695 | testIsOpeningParenthesis | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52698 | testIsRnaSecondaryStructureSymbol | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52700 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52700 | testCopyConstructors | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52700 | testEqualsAndHashCode | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52707 | testGetDetailsReport | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52708 | testGetDetailsReport_virtualFeature | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52709 | testGetStrand | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52709 | testGetValue | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52709 | testIsContactFeature | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52710 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52710 | backupsEnabledNoRollMaxTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52758 | backupsEnabledReverseRollMaxTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52795 | backupsEnabledRollMaxTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52827 | backupsEnabledSingleFileBackupTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52842 | noBackupsEnabledTest | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52853 | <<cleanupTmpFiles | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52853 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52854 | testGetApplicableScoreModels | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52855 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52855 | testIsGap | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52856 | testIsNucleotide | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52856 | testIsNucleotideSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52856 | testIsNucleotide_sequences | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52856 | testIsSameResidue | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52856 | testPID_includingGaps | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52856 | testPID_ungappedOnly | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52856 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52856 | testParseAttributeMap | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52857 | testParseNameValuePairs | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52858 | testTrimMapping | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52858 | testGetSchemeClass | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52858 | testToString | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52858 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52858 | testSeqFeatureAddition | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52859 | testAddOrRemove | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52859 | testAddSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52859 | testConstructor_list | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52860 | testContains | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52860 | testCopyConstructor | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52860 | testGetColourScheme | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52861 | testSetContext | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52862 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52862 | expectedNullPointerException | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52862 | getBioJsMSAVersions | Test worker@1565713391 | ||||||
| 23/07/02 10:12:07 | 52863 | getJalviewAlignmentAsJsonString | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 55913 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 55914 | testAddMenuItems_forAlignFrame | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 55926 | testAddMenuItems_nucleotide | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 55940 | testAddMenuItems_peptide | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 55941 | testAddMenuItems_simpleOnly | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 55942 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 55942 | testGetCanonicalName | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 55943 | testParseToDbRef | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 55943 | testParseToDbRef_PDB | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 55943 | testSearchRefs_accessionid | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 55943 | testSearchRefs_noMapping | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 55943 | testSearchRefs_wildcardAccessionid | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 55943 | testSearchRefs_withMapping | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 55943 | testSelectRefs | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 55943 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 55943 | testGetHelper | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 55944 | testFindColour | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 55945 | testFindColour_ignoreGaps | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56008 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56009 | test_seqIdNameEquals | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56009 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56009 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56009 | testAddAlignmentAnnotation | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56010 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56010 | testAddDBRef | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56010 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56010 | testAddPDBId | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56011 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56011 | testAddSequenceFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56012 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56012 | testCheckValidRange | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56012 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56012 | testCopyConstructor_noDataset | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56013 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56013 | testCopyConstructor_withDataset | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56013 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56013 | testCreateDatasetSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56013 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56013 | testDeleteChars | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56013 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56013 | testDeleteChars_withDbRefsAndFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56013 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56013 | testDeleteChars_withGaps | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56014 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56014 | testDeriveSequence_existingDataset | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56014 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56015 | testDeriveSequence_noDatasetGapped | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56015 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56015 | testDeriveSequence_noDatasetUngapped | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56015 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56015 | testFindFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56015 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56016 | testFindIndex | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56016 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56016 | testFindIndex_withCursor | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56016 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56016 | testFindPosition | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56017 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56017 | testFindPositionMap | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56017 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56017 | testFindPosition_withCursor | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56018 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56018 | testFindPosition_withCursorAndEdits | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56018 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56018 | testFindPositions | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56019 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56019 | testGapBitset | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56019 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56019 | testGapMap | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56019 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56019 | testGetAlignmentAnnotations_forCalcIdAndLabel | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56019 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56019 | testGetAlignmentAnnotations_forCalcIdLabelAndDescription | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56019 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56019 | testGetAnnotation | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56020 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56020 | testGetAnnotation_forLabel | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56020 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56020 | testGetCharAt | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56020 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56020 | testGetPrimaryDBRefs_nucleotide | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56020 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56020 | testGetPrimaryDBRefs_peptide | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56021 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56021 | testGetSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56021 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56021 | testGetSequenceFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56021 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56021 | testGetStartGetEnd | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56021 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56021 | testGetSubsequence | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56022 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56022 | testInsertCharAt | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56022 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56022 | testInsertGapsAndGapmaps | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56022 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56022 | testIsProtein | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56022 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56022 | testIsProteinWithXorNAmbiguityCodes | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56022 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56022 | testLocateVisibleStartofSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56023 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56023 | testReplace | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56024 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56024 | testSetDatasetSequence_cascading | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56024 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56024 | testSetDatasetSequence_toSelf | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56024 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56024 | testSetName | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56025 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56025 | testTransferAnnotation | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56025 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56025 | testUpdatePDBIds | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56026 | testParse_noNumbering | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56027 | testParse_withNumbering | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56028 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56028 | testParseLocation | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56029 | testGetColorTooltip | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56032 | testSaveLoad | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56087 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56087 | testResolveExonerateGff | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56098 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56098 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56098 | testGetName | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56099 | testIsApplicableTo | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56100 | testIsApplicableTo_dynamicColourScheme | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56103 | testBasicBoundsIterator | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56103 | testBoundsIteratorUsingCursor | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56103 | testBoundsIteratorUsingNullCursor | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56104 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56104 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56104 | testExtractGaps | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56104 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56105 | testGetMappingForS1 | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56106 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56106 | testPrintAlignment | Test worker@1565713391 | ||||||
| 23/07/02 10:12:10 | 56108 | >>setUpBeforeClass | Test worker@1565713391 | ||||||
| 23/07/02 10:12:11 | 56194 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:11 | 56194 | openCrossrefsForEnsemblTwice | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 63868 | <<tearDownAfterClass | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 63922 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 63922 | testFeatureScoreModel | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 63946 | testFeatureScoreModel_HiddenColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 63968 | testFeatureScoreModel_hiddenFirstColumn | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 63985 | testFindDistances | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64007 | testFindDistances_withParams | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64023 | testFindFeatureAt_PointFeature | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64041 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64041 | testAppendPercentage | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64042 | testForm_float | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64043 | testFormat_scientific | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64046 | testFormat_scientific_overflow | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64047 | testRepeat | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64048 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64048 | testProcessProteinMatch | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64049 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64049 | testCodonTranslate | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64050 | testCodonTranslate_ambiguityCodes | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64050 | testGetCanonicalAminoAcid | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64052 | testGetDssp3State | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64053 | testGetResidues_nucleotide | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64053 | testGetResidues_peptide | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64053 | testGetSingleCharacterCode | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64053 | testPhysicoChemicalProperties | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64055 | testMultipleVisibleRegions | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64055 | testSimpleVisibleRegions | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64055 | testVisibleRegionsAtHiddenEdges | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64057 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64057 | testAdjustForProteinLength | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64058 | testParse | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64071 | testParseToRNA | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64084 | testParse_codonStartNot1 | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64084 | testParse_noUniprotXref | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64084 | testRemoveQuotes | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64085 | testArrayToList | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64085 | testComputePID_matchLongestSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64085 | testComputePID_matchShortestSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64085 | testComputePID_matchesComparisonPID | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64086 | testGetPairwiseScore | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64086 | testIsA_sequenceVariant | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64086 | testFindColour | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64086 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64087 | testHasNextAndNextEndHidden | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64088 | testHasNextAndNextNoHidden | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64088 | testHasNextAndNextStartHidden | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64088 | testHasNextAndNextWithHidden | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64089 | testLastNextEndHidden | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64089 | testLastNextNoHidden | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64089 | testLastNextStartHidden | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64089 | testLastNextWithHidden | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64089 | testRemove | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64091 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64091 | testAttributeNameComparator | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64091 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64092 | testDatatype | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64092 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64092 | testGetDescription | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64092 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64092 | testGetMinMax | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64093 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64093 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64094 | readGff3File | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64096 | simpleGff3FileClass | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64097 | simpleGff3FileLoader | Test worker@1565713391 | ||||||
| 23/07/02 10:12:18 | 64115 | simpleGff3RelaxedIdMatching | Test worker@1565713391 | ||||||
| 23/07/02 10:12:19 | 64116 | testOutputFeatureFilters | Test worker@1565713391 | ||||||
| 23/07/02 10:12:19 | 64117 | testParse | Test worker@1565713391 | ||||||
| 23/07/02 10:12:19 | 64155 | testParseFilters | Test worker@1565713391 | ||||||
| 23/07/02 10:12:19 | 64156 | testParse_jalviewFeaturesOnly | Test worker@1565713391 | ||||||
| 23/07/02 10:12:19 | 64172 | testParse_mixedJalviewGff | Test worker@1565713391 | ||||||
| 23/07/02 10:12:19 | 64190 | testParse_pureGff3 | Test worker@1565713391 | ||||||
| 23/07/02 10:12:19 | 64207 | testPrintGffFormat | Test worker@1565713391 | ||||||
| 23/07/02 10:12:19 | 64226 | testPrintGffFormat_withFilters | Test worker@1565713391 | ||||||
| 23/07/02 10:12:19 | 64241 | testPrintJalviewFormat | Test worker@1565713391 | ||||||
| 23/07/02 10:12:19 | 64259 | testPrintJalviewFormat_withFilters | Test worker@1565713391 | ||||||
| 23/07/02 10:12:19 | 64276 | <<tearDownAfterClass | Test worker@1565713391 | ||||||
| 23/07/02 10:12:19 | 64276 | testLog4j | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65904 | testBlosum62_values | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65910 | testBuildSymbolIndex | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65911 | testBuildSymbolIndex_nonAscii | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65911 | testComputePairwiseScores | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65912 | testConstructor | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65912 | testConstructor_gapDash | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65912 | testConstructor_matrixNotSquare | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65912 | testConstructor_matrixTooBig | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65912 | testConstructor_matrixTooSmall | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65913 | testEqualsAndHashCode | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65913 | testGetMatrix | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65914 | testGetMatrixIndex | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65914 | testGetMaximumScore | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65914 | testGetMinimumScore | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65914 | testGetPairwiseScore | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65914 | testGetSize | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65914 | testIsSymmetric | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65915 | testOutputMatrix_html | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65915 | testOutputMatrix_roundTrip | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65916 | testSymmetric | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65927 | testcomputeSimilarity_matchLongestSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65927 | testcomputeSimilarity_matchShortestSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65927 | testFindColour | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65928 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65929 | testDoLoad | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 65980 | testDoLoad_reverseStrand | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66011 | testDoLoad_vepCsq | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66076 | testLoadVCFContig | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66087 | testAnd | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66087 | testFromString | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66088 | testGetMatchers | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66089 | testIsEmpty | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66089 | testMatches_byAttribute | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66089 | testMatches_compoundKey | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66090 | testOr | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66090 | testToStableString | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66090 | testToString | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66091 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66091 | testDeregisterFileFormat | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66091 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66091 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66091 | testForName | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66092 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66092 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66092 | testGetFormats | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66092 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66092 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66092 | testGetReadableFormats | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66092 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66093 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66093 | testGetWritableFormats | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66093 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66093 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66093 | testIsIdentifiable | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66093 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66093 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66093 | testRegisterFileFormat | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66094 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66094 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66094 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66094 | testAddMapList | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66094 | testAddMapList_contiguous | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66094 | testAddMapList_sameMap | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66095 | testAddOffsetPositions | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66095 | testAddRange | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66095 | testCoalesceRanges | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66095 | testConstructor | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66095 | testConstructor_mergeRanges | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66096 | testConstructor_withLists | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66096 | testCountPositions | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66096 | testEquals | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66097 | testGetInverse | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66097 | testGetMappedOffsetsForPositions | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66098 | testGetOverlapsInFrom_withIntrons | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66098 | testGetOverlapsInTo_withIntrons | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66099 | testGetPositionsForOffsets | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66099 | testGetRanges | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66099 | testIsFromForwardStrand | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66099 | testIsToForwardsStrand | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66100 | testLocateInFrom_noIntrons | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66100 | testLocateInFrom_reverseStrand | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66100 | testLocateInFrom_withIntrons | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66100 | testLocateInFrom_withOverlap | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66100 | testLocateInTo_noIntrons | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66101 | testLocateInTo_withIntrons | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66101 | testLocateInTo_withOverlap | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66101 | testToString | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66101 | testTraverse | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66102 | testTraverseToPosition | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66102 | testConstructor | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66102 | testCopy | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66102 | testEquals | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66103 | testFindMinMax | Test worker@1565713391 | ||||||
| 23/07/02 10:12:20 | 66103 | testFindMinMax_timing | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66186 | testMultiply | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66186 | testPostMultiply | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66186 | testPreMultiply | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66186 | testPreMultiply_tooFewColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66187 | testPreMultiply_tooManyColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66187 | testReverseRange_maxToZero | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66187 | testReverseRange_swapMinMax | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66188 | testTred_reproducible | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66189 | testConstructor | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66190 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66190 | testConstructor_coloursArray | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66190 | testParseAppletParameter | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66191 | testToAppletParameter | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66192 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66193 | testContains | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66193 | testGetValue | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66193 | testGetValue_decoded | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66194 | testNextValue | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66194 | testGetRanges | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66194 | testFromString | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66196 | testGetAttribute | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66196 | testGetMatcher | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66196 | testIsByAttribute | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66197 | testIsByLabel | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66197 | testIsByScore | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66197 | testMatches_byAttribute | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66197 | testMatches_byLabel | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66198 | testMatches_byScore | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66198 | testToStableString | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66198 | testToString | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66199 | >>setUpBeforeClass | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66199 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66200 | testGzipIo | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66201 | testGziplocalFileIO | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66202 | testIsGzipInputStream | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66202 | testNonGzipURLIO | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66203 | testNonGziplocalFileIO | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66203 | testStarsInFasta1 | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66203 | testStarsInFasta2 | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66204 | <<tearDownAfterClass | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66204 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66204 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66204 | testBuildSearchResults | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66204 | testBuildSearchResults_withIntron | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66205 | testContains | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66205 | testFindMappingsForSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66205 | testFindMappingsForSequenceAndOthers | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66205 | testFindOverlap | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66205 | testFlattenRanges | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66205 | testFlattenRanges_reverseStrand | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66206 | testGetLength | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66206 | testMapColumnSelection_dnaToProtein | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66207 | testMapColumnSelection_hiddenColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66208 | testMapColumnSelection_null | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66209 | testMapColumnSelection_proteinToDna | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66210 | testMapEditCommand | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66210 | testMapSequenceGroup_columns | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66211 | testMapSequenceGroup_region | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66213 | testMapSequenceGroup_sequences | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66214 | testMapSequenceGroup_sharedDataset | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66215 | testRangeContains | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66215 | testRemoveEndPositions | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66215 | testRemoveStartPositions | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66215 | testRemoveStartPositions_reverseStrand | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66215 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66217 | testGetRotation | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66218 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66218 | testPreMultiply | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66218 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66218 | testPrint | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66221 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66221 | testVectorMultiply | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66222 | >>setUpBeforeClass | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66223 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66223 | testSetDateProperty | Test worker@1565713391 | ||||||
| 23/07/02 10:12:21 | 66223 | testVersionChecker | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76225 | <<tearDownAfterClass | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76226 | testAddFeature | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76226 | testContains | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76227 | testDelete | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76227 | testDelete_readd | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76227 | testFindFeatures_contactFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76228 | testFindFeatures_mixed | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76228 | testFindFeatures_nested | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76228 | testFindFeatures_nonNested | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76228 | testGetFeatureGroups | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76229 | testGetFeatureLength | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76229 | testGetFeaturesForGroup | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76229 | testGetMinimumScore_getMaximumScore | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76229 | testGetPositionalFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76230 | testGetTotalFeatureLength | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76230 | testIsEmpty | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76230 | testListContains | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76230 | testMax | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76230 | testMin | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76230 | testShiftFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76231 | testGcd | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76231 | testConstructor | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76232 | testFillRatio | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76232 | testPostMultiply | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76233 | testPreMultiply | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76233 | testPreMultiply_sparseProduct | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76233 | testPreMultiply_tooFewColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76234 | testPreMultiply_tooManyColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76234 | testTqli_matchesMatrix | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76236 | testTranspose | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76236 | testTred_matchesMatrix | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76238 | testTred_reproducible | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76243 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76243 | reportCurrentWorkingDirectory | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76243 | testAllInputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76243 | testAllInputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76243 | testAllInputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76243 | testAllInputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76243 | testAllInputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76243 | testAllInputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76243 | testAllInputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76243 | testAllInputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76243 | testAllInputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76244 | testAllInputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76244 | testAllInputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:12:31 | 76244 | testHeadlessModeOutputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:12:33 | 78803 | testHeadlessModeOutputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:12:36 | 81607 | testHeadlessModeOutputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:12:39 | 84153 | testHeadlessModeOutputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:12:41 | 86978 | testHeadlessModeOutputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:12:44 | 89500 | testHeadlessModeOutputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:12:47 | 92337 | testHeadlessModeOutputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:12:49 | 94885 | testHeadlessModeOutputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:12:52 | 97467 | testHeadlessModeOutputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:12:54 | 100045 | testHeadlessModeOutputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:12:57 | 102598 | testHeadlessModeOutputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:13:00 | 105251 | testHeadlessModeOutputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:13:02 | 107929 | testHeadlessModeOutputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:13:05 | 110510 | testHeadlessModeOutputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:13:08 | 113172 | testHeadlessModeOutputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:13:10 | 115809 | testHeadlessModeOutputOperations | Test worker@1565713391 | ||||||
| 23/07/02 10:13:13 | 118721 | >>setUpBeforeClass | Test worker@1565713391 | ||||||
| 23/07/02 10:13:13 | 118769 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:13:13 | 118769 | gatherViewsHere | Test worker@1565713391 | ||||||
| 23/07/02 10:13:16 | 121873 | noDuplicatePdbMappingsMade | Test worker@1565713391 | ||||||
| 23/07/02 10:13:18 | 123768 | testColourByAnnotScores | Test worker@1565713391 | ||||||
| 23/07/02 10:13:18 | 124057 | testCopyViewSettings | Test worker@1565713391 | ||||||
| 23/07/02 10:13:21 | 126266 | testIsVersionStringLaterThan | Test worker@1565713391 | ||||||
| 23/07/02 10:13:21 | 126267 | testMergeDatasetsforManyViews | Test worker@1565713391 | ||||||
| 23/07/02 10:13:21 | 126958 | testMergeDatasetsforViews | Test worker@1565713391 | ||||||
| 23/07/02 10:13:21 | 127096 | testPcaViewAssociation | Test worker@1565713391 | ||||||
| 23/07/02 10:13:22 | 127444 | testRNAStructureRecovery | Test worker@1565713391 | ||||||
| 23/07/02 10:13:22 | 127877 | testSaveLoadFeatureColoursAndFilters | Test worker@1565713391 | ||||||
| 23/07/02 10:13:22 | 127960 | testStoreAndRecoverColourThresholds | Test worker@1565713391 | ||||||
| 23/07/02 10:13:22 | 128094 | testStoreAndRecoverExpandedviews | Test worker@1565713391 | ||||||
| 23/07/02 10:13:28 | 133505 | testStoreAndRecoverGeneLocus | Test worker@1565713391 | ||||||
| 23/07/02 10:13:28 | 133676 | testStoreAndRecoverGroupRepSeqs | Test worker@1565713391 | ||||||
| 23/07/02 10:13:28 | 133834 | testStoreAndRecoverPDBEntry | Test worker@1565713391 | ||||||
| 23/07/02 10:13:29 | 134424 | testStoreAndRecoverReferenceSeqSettings | Test worker@1565713391 | ||||||
| 23/07/02 10:13:34 | 139435 | testTCoffeeScores | Test worker@1565713391 | ||||||
| 23/07/02 10:13:34 | 139591 | viewRefPdbAnnotation | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141047 | <<tearDownAfterClass | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141089 | testFormatMessage_invalid | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141090 | testGetStringOrReturn | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141090 | testGetString_invalid | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141090 | testConstructor | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141091 | testDelete | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141091 | testDeleteAll | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141091 | testFindFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141091 | testGetAllFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141091 | testGetContactFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141091 | testGetFeatureCount | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141092 | testGetFeatureGroups | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141092 | testGetFeatureTypes | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141092 | testGetFeatureTypesForGroups | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141092 | testGetFeatureTypes_byOntology | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141093 | testGetFeaturesByOntology | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141093 | testGetFeaturesForGroup | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141094 | testGetMinimumScore_getMaximumScore | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141094 | testGetNonPositionalFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141094 | testGetPositionalFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141095 | testGetTotalFeatureLength | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141095 | testHasFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141095 | testIsOntologyTerm | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141095 | testShiftFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141096 | testSortFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141096 | testVarargsToTypes | Test worker@1565713391 | ||||||
| 23/07/02 10:13:35 | 141097 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:36 | 141245 | testHiDPISettingInit | Test worker@1565713391 | ||||||
| 23/07/02 10:13:36 | 141924 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:13:36 | 141925 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:13:36 | 141925 | testParseHtml_noLinks | Test worker@1565713391 | ||||||
| 23/07/02 10:13:36 | 141926 | testParseHtml_withLinks | Test worker@1565713391 | ||||||
| 23/07/02 10:13:36 | 141926 | testParseHtml_withLinksWithEncoding | Test worker@1565713391 | ||||||
| 23/07/02 10:13:36 | 141926 | testParseHtml_withLinksWithParameters | Test worker@1565713391 | ||||||
| 23/07/02 10:13:36 | 141927 | testHiDPISettings | Test worker@1565713391 | ||||||
| 23/07/02 10:13:38 | 143648 | testHiDPISettings | Test worker@1565713391 | ||||||
| 23/07/02 10:13:40 | 145390 | testHiDPISettings | Test worker@1565713391 | ||||||
| 23/07/02 10:13:42 | 147190 | testHiDPISettings | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148953 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148953 | testEscapeBackslashes | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148953 | testIsControlDown_mac | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148953 | testIsControlDown_notMac | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148954 | testPathEquals | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148955 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148955 | testSeparatorListToArray | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148964 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148964 | testCharSortByFloat | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148965 | testCharSortByInt | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148965 | testSortByInt | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148965 | testSortByString | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148966 | testSort_byDoubleValues | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148966 | testSort_byFloatValues | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148967 | testSort_byIntValues | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148967 | testSort_byStringValues | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148967 | testSort_charSortByFloat_mostlyZeroValues | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148967 | testSort_charSortByInt_mostlyZeroValues | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148967 | testGetMemorySetting | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148972 | testCountDisjunction | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148973 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148973 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148973 | testAddEdit_groupInsertGaps | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148973 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148973 | testAddEdit_multipleDeleteGap | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148973 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148973 | testAddEdit_multipleInsertGap | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148973 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148973 | testAddEdit_removeAllGaps | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148973 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148973 | testAppendEdit_deleteGap | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148974 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148974 | testAppendEdit_insertGap | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148974 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148974 | testCut | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148974 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148974 | testCut_withFeatures | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148975 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148975 | testCut_withFeatures5prime | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148975 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 148975 | testCut_withFeatures_exhaustive | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149007 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149007 | testPriorState_multipleInserts | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149007 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149007 | testPriorState_removeAllGaps | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149007 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149007 | testPriorState_removeGappedCols | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149008 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149008 | testPriorState_removeGapsMultipleSeqs | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149008 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149008 | testPriorState_singleDelete | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149008 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149009 | testPriorState_singleInsert | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149009 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149009 | testPriorState_singleInsertWithOffset | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149010 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149010 | testReplace | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149011 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149011 | testReplaceFirstResiduesWithGaps | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149011 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149011 | testReplace_withGaps | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149011 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149011 | testUndo_cut | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149012 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149012 | testUndo_deleteGap | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149012 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149012 | testUndo_insertGap | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149012 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149012 | testUndo_multipleCommands | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149013 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149013 | testUndo_multipleInsertGaps | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149013 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149013 | testParseMap | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149014 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149014 | testAdd | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149014 | testKeyAt_ValueAt | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149014 | testOverflow | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149014 | testPut | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149014 | testUnderflow | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149015 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149015 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149015 | testTrimLeft_noColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149016 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149016 | testTrimLeft_oneColumn | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149016 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149016 | testTrimLeft_withUndoAndRedo | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149017 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149017 | testTrimRight_noColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149017 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149017 | testTrimRight_oneColumn | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149017 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149018 | testTrimRight_withUndoAndRedo | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149018 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149018 | testFindColumnsWithFeature | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149050 | testSelectColumnsWithHighlight | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149068 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149069 | testArrayToSeparatorList | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149069 | testCompareVersions | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149069 | testDeleteChars | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149069 | testGetLastToken | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149069 | testInsertCharAt | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149070 | testListToDelimitedString | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149070 | testParseInt | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149070 | testSeparatorListToArray | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149071 | testStripHtmlTags | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149071 | testToSentenceCase | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149071 | testUrlDecode | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149072 | testUrlEncode | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149072 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149072 | testAddMap | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149073 | testCouldReplaceSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149073 | testFindAlignedSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149073 | testGetCoveringCodonMapping | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149073 | testGetCoveringMapping | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149074 | testGetMappedCodons | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149074 | testGetMappedCodons_dnaVariants | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149074 | testGetMappedCodons_forSubSequences | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149074 | testGetMappedRegion | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149074 | testGetMappedRegion_eitherWay | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149075 | testIsRealisableWith | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149075 | testMarkMappedRegion | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149075 | testRealiseWith | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149076 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149076 | testCreateLinksForNonDynamic | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149076 | testCreateLinksFromNullSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149076 | testCreateLinksFromSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149077 | testLinkComparator | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149077 | testLinksWithTargets | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149077 | testMakeUrlNoRegex | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149078 | testMakeUrlWithRegex | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149088 | testUrlLinkCreationNoRegex | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149089 | testUrlLinkCreationWithRegex | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149090 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149090 | testAnother | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149090 | testNext | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149090 | testNext_incompleteCodon | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149091 | testNext_unmappedPeptide | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149091 | testNext_withOffset | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149091 | testFromString | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149091 | testGetStableName | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149091 | testToString | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149092 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149092 | testEquals | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149092 | testToString | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149092 | testConstructor | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149093 | testEquals | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149094 | testHashCode | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149094 | testMatches_float | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149094 | testMatches_floatValueIntegerCondition | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149094 | testMatches_floatWithStringCondition | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149094 | testMatches_long | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149095 | testMatches_pattern | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149095 | testNumericMatch_nullOrInvalidValue | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149096 | testToString | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149096 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149097 | testAdjustForAlignment | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149097 | testCopyConstructor | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149098 | testGetDefaultRnaHelixSymbol | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149098 | testIsQuantitative | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149099 | testLiftOver | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149105 | testMakeVisibleAnnotation | Test worker@1565713391 | ||||||
| 23/07/02 10:13:43 | 149105 | >>setUpAlignment | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149117 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149119 | testConstructor | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149119 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149120 | testDragging | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149122 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149123 | testFromMouseWithHiddenColsAtEnd | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149124 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149125 | testFromMouseWithHiddenColsAtStart | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149126 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149127 | testFromMouseWithHiddenColsInMiddle | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149129 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149130 | testFromMouseWithHiddenRowsAtEnd | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149132 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149133 | testFromMouseWithHiddenRowsAtStart | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149134 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149135 | testFromMouseWithHiddenRowsInMiddle | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149136 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149137 | testPositionInBox | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149138 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149138 | testSetBoxFromMouseClick | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149140 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149141 | testSetBoxFromViewport | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149142 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149142 | testSetBoxFromViewportHiddenColsAtEnd | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149143 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149144 | testSetBoxFromViewportHiddenColsAtStart | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149145 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149146 | testSetBoxFromViewportHiddenColsInMiddle | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149147 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149147 | testSetBoxFromViewportHiddenRowsAtEnd | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149150 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149151 | testSetBoxFromViewportHiddenRowsAtStart | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149152 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149153 | testSetBoxFromViewportHiddenRowsInMiddle | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149154 | <<cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149154 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149155 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149156 | testAddCodonFrame | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149157 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149158 | testAddSequencePreserveDatasetIntegrity | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149159 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149160 | testAlignAs_cdnaAsProtein | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149160 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149162 | testAlignAs_cdnaAsProtein_singleSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149163 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149164 | testAlignAs_dnaAsDna | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149165 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149166 | testAlignAs_proteinAsCdna | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149167 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149168 | testAppend | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149169 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149170 | testAssertDatasetIsNormalised | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149171 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149172 | testCopyConstructor | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149173 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149174 | testCreateDatasetAlignment | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149174 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149176 | testCreateDatasetAlignmentWithMappedToSeqs | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149176 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149178 | testCreateDataset_updateDbrefMappings | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149178 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149179 | testDeleteAllAnnotations_excludingAutocalculated | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149179 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149181 | testDeleteAllAnnotations_includingAutocalculated | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149181 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149182 | testDeleteHiddenSequence | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149182 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149184 | testDeleteSequenceByIndex | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149185 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149186 | testDeleteSequenceBySeq | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149186 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149187 | testFindAnnotation_byCalcId | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149188 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149189 | testFindAnnotations_bySeqLabelandorCalcId | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149189 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149190 | testFindGroup | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149190 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149192 | testFindOrCreateForNullCalcId | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149192 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149193 | testGetVisibleWidth | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149193 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149195 | testGetWidth | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149195 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149196 | testPadGaps | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149196 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149198 | testPropagateInsertions | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149199 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149200 | testPropagateInsertionsOverlap | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149201 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149202 | testSetDataset_selfReference | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149202 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149203 | testSetHiddenColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149203 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149205 | testVerifyAlignmentDatasetRefs | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149211 | >>setUpAlignment | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149221 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149222 | testConstructor | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149222 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149223 | testDragging | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149224 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149225 | testFromMouseWithHiddenColsAtEnd | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149226 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149227 | testFromMouseWithHiddenColsAtStart | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149228 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149228 | testFromMouseWithHiddenColsInMiddle | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149229 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149230 | testFromMouseWithHiddenRowsAtEnd | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149232 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149233 | testFromMouseWithHiddenRowsAtStart | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149233 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149234 | testFromMouseWithHiddenRowsAtStartWrapped | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149235 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149235 | testFromMouseWithHiddenRowsInMiddle | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149236 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149237 | testPositionInBox | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149237 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149238 | testSetBoxFromMouseClick | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149240 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149241 | testSetBoxFromViewport | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149242 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149243 | testSetBoxFromViewportHiddenColsAtEnd | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149244 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149245 | testSetBoxFromViewportHiddenColsAtStart | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149246 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149246 | testSetBoxFromViewportHiddenColsInMiddle | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149248 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149249 | testSetBoxFromViewportHiddenRowsAtEnd | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149250 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149251 | testSetBoxFromViewportHiddenRowsAtStart | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149252 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149252 | testSetBoxFromViewportHiddenRowsInMiddle | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149253 | <<cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149253 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149254 | testGetVisibleAlignmentGapChar | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149254 | testGetVisibleContigs | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149267 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149268 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149268 | testEventFiring | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149269 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149269 | testGetAbsoluteAlignmentHeight | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149269 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149269 | testGetAbsoluteAlignmentWidth | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149269 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149269 | testGetWrappedMaxScroll | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149270 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149270 | testGetWrappedScrollPosition | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149271 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149271 | testPageUpDown | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149271 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149271 | testPageUpDownWrapped | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149272 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149272 | testScrollRight | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149272 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149272 | testScrollRightWithHidden | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149272 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149272 | testScrollToVisible | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149273 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149273 | testScrollToWrappedVisible | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149273 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149273 | testScrollUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149273 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149273 | testScrollUpWithHidden | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149273 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149273 | testScrollUp_wrapped | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149274 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149274 | testSetEndSeq | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149274 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149275 | testSetStartEndRes | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149275 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149275 | testSetStartEndResWrapped | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149275 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149275 | testSetStartEndSeq | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149275 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149275 | testSetStartRes | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149275 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149275 | testSetStartResAndSeq | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149275 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149276 | testSetStartSeq | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149276 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149276 | testSetViewportHeight | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149276 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149276 | testSetViewportLocation | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149277 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149277 | testSetViewportStartAndHeight | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149277 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149277 | testSetViewportStartAndWidth | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149277 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149277 | testSetViewportStartAndWidthWrapped | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149278 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149278 | testSetViewportWidth | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149278 | >>cleanUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149278 | testViewportRanges | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149278 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149278 | testHasNextAndNext | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149278 | testLastNext | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149279 | testOneElement | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149279 | testRemove | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149279 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149279 | testCopyConstructor | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149280 | testEquals | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149281 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149281 | >>setUp | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149290 | testRemoveWorkerForAnnotation | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149391 | >>setup | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149392 | testHasNextAndNext | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149392 | testLastNext | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149393 | testOneElement | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149393 | testRemove | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149393 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149393 | testConstructor | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149394 | >>setUpJvOptionPane | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149394 | testAddElement | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149395 | testCopyConstructor | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149395 | testEquals | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149395 | testFilterAnnotations | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149396 | testGetSelected | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149397 | testGetSelectedRanges | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149397 | testGetSelected_concurrentModification | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149397 | testGetSelected_isReadOnly | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149398 | testHideColumns_withSelection | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149399 | testHideSelectedColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149400 | testInvertColumnSelection | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149400 | testMarkColumns | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149400 | testMarkColumns_extend | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149400 | testMarkColumns_invert | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149400 | testMarkColumns_toggle | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149400 | testMaxColumnSelection | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149400 | testMinColumnSelection | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149401 | testRemoveElement | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149401 | testSetElementsFrom | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149401 | testStretchGroup_expand | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149401 | testStretchGroup_shrink | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149401 | <<tearDown | Test worker@1565713391 | ||||||
| 23/07/02 10:13:44 | 149401 | <<cleanUpSiftsClient | Test worker@1565713391 |